CDS

Accession Number TCMCG057C11877
gbkey CDS
Protein Id XP_018473121.1
Location join(13612442..13612794,13613238..13613262,13613404..13613533,13613627..13613757,13613836..13613924,13614005..13614081,13614156..13614289)
Gene LOC108844371
GeneID 108844371
Organism Raphanus sativus

Protein

Length 312aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018617619.1
Definition PREDICTED: transcription initiation factor IIB-1-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category K
Description Transcription initiation factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K03124        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03022        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
map03022        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0001558        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006935        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009856        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009960        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010183        [VIEW IN EMBL-EBI]
GO:0010769        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0022604        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0040008        [VIEW IN EMBL-EBI]
GO:0040011        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042330        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043900        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044706        [VIEW IN EMBL-EBI]
GO:0045595        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048638        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048868        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0050918        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051510        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0060284        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080092        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGGACGCCTACTGCACGGATTGCAAGAGGGAGACGGAGCTGGTGGTGGATCACTCCGCCGGAGACACGCTCTGCTCCGAGTGCGGCCTCGTTCTCGAGTCCCACTCCATCGACGAGACCTCCGAGTGGCGTACCTTCGCCAACGAGTCTTCCAACGCCGATCCCAACCGTGTCGGCGGTCCCACCAACCCTCTCCTCGCCGACAGCGCCCTCACCACCGTCATCGCCAAGACCAACGGCTCCTCCGGCGATTTCTTGTCTAACTCTCTCGGGAGGTGGCAGAATCGTAACGGTAGTGCTGAGCGTGGGTTGATCCAGGCGTTTAAGACAATTGCCACCATGTCCGACAGGTTGGGGCTTGTCGGAACTATCAAGGATCGGGCTAATGAGATATTTAAGAGGCTGGAGGATCAAAAGTCAACCAGGGGAAGAAACCAGGATGCACTTTTGGCAGCCTGCTTGTACATTTCTTGTAGACAAGAGGACAAGCCACGGACTATTAAGGAAATTTGCTCTGTTGCCAATGGGGCGACAAAGAAGGAAATTGGACGAGCGAAGGACTTTATTGTTAAGACGTTGGGGCTTGAGACTGGCCATTCTGTGGAATTGGGCGCTATACATGCTGGTGACTTCATGAAAAGGTTCTGCTCTAACCTTGGAATGTCTCATCAAGCCGTTAGAGCTGCTGAGGAAGCTGTGAAAAAATCTGAGGAATTTGATATAAGGAGGAGTCCTATATCAATAGCAGCAGTTGTTATCTATATCATAACCCAGCTTTCTGATGATAAGAAGCCTCTCAAAGATATAGCGGTGGCTACAGGAGTAGCAGAGGGGACAATAAGAAACTCATACAAGGACTTGTATCCTCATCTACCAAAGATCATACCAAGTTGGTATGCTAAGGAAGAGGATCTTAAGAACCTCTCAAGTCCTTGA
Protein:  
MSDAYCTDCKRETELVVDHSAGDTLCSECGLVLESHSIDETSEWRTFANESSNADPNRVGGPTNPLLADSALTTVIAKTNGSSGDFLSNSLGRWQNRNGSAERGLIQAFKTIATMSDRLGLVGTIKDRANEIFKRLEDQKSTRGRNQDALLAACLYISCRQEDKPRTIKEICSVANGATKKEIGRAKDFIVKTLGLETGHSVELGAIHAGDFMKRFCSNLGMSHQAVRAAEEAVKKSEEFDIRRSPISIAAVVIYIITQLSDDKKPLKDIAVATGVAEGTIRNSYKDLYPHLPKIIPSWYAKEEDLKNLSSP